QC Geography Microbiome

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Current state of DAG3 Project:

DAG3 data quality control results

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• Total samples processed: 8534
• Sample QC results:
• Failed : 31 / 8534 (0.36 %)
• Low quality : 96 / 8534 (0.88 %)

Read number:

• Samples have 26.3 Mil reads (3943.3Mb) +/- 3.9 Mil reads (584.3 Mb)

GC content:

• Samples have GC content = 51.4% +/- 2.7%

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DAG3 Microbiome summary - Rarefaction curves

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DAG3 Microbiome summary - Microbiome composition

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Microbiome composition across Dutch Provinces

NOTE: This data is not properly linked yet, plot is for demonstration only!

DAG3 Bacterial pathways data summary